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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851097.1_cds_XP_016511379.1_24126
CDS Infomation

[gene=LOC107828555] [db_xref=GeneID:107828555] [protein=probable pectinesterase 29] [protein_id=XP_016511379.1] [location=join(40739..40971,41496..41655,42133..42345,43140..43384,44087..44246,45720..45896)] [gbkey=CDS]
Sequence

ATGGCTTCTTTTTTCTGTAAAACTCTTGTTTTTTTCTTCATGGGGTTTGTTGAACTAGGA
AATGCAAGATATATTAGTGATTTTCAGTGGAAACAGCAAAAGATGAAGTACACAACAGTG
TATGTGGATCCATCTGGACATGGCCAGTTCAAAACTATCCAATCAGCCATTGATTCTGTC
CCTCAAAATAACCAAAATTGGATCTGTATTAACATCAAAGCTGGACAATATAGGGAACAA
GTGAAAATCCCTAGAGAAAAGCCATATATTTATCTTAAAGGAGGGGATCAAGGAAAAACA
AGTGTGACTTGGGATGCTCATGACTCAATTGCTACAGATGCTACTTTCACTTCAGAAGCT
GATAATACAATTGTGGAAAGCATAACCTTTATAAATTCTTACAATTATCCTCCGAAAAGC
AACAATAATCCGAGGGTGGTGGCGGTGGCGGCGATGATTTCCGGCGACAAGTCGGTGTTT
TATAGGTGTGAATTTCTTGGATTACAAGACACATTATGGGATGTTCAAGGAAGGCATTAT
TTCAAGCTTTGCACCATTGAAGGAGCTGTTGATTTCATCTTTGGTAATGGTCAATCTCTT
TATGAGAGTTGTACTATATCAGTAAATGCAAGAGCTTTAGAAGGATTGACAGGGTTCATA
ACAGCACAAGGAAGATCAAACCCTAAAGATGAAAGTGGTTTTATTTTCAAAAACTGTAAT
GTTATAGGAAGTGGACAAACATTCTTGGGCAGGCCATGGAGAGACTATGCAAGAGTTATA
TTCTATGGTTGCAATATGTCAAATGTCATCACTCCTGAAGGTTGGACTGCTGGAGTTTAT
GTTGGCAAAGAGAAACAATTAACATTTGCTGAGGAAAGTTGCAAAGGAATGGGATCAAGC
ACTTCAAAAAGAGTGCAATGGGAAGCCAAGTTGAGCCAACAAGAGTTACAACAGTTAACA
AGTCTTTCCTTCATTGATAACGAGGGCTGGATTACGAAACAACCCCTAAAAATGGATATT
CTCAATCAAAATGATCCGACTGATGTCAACACACATGCAAGTGCAGTTGCGGCGGCCGGT
GGAGTTGCTAACACCAGTGTTGACATTAACAACCCTCTTTGCCTTCATCCTTCTGATAAC
CCTGGGGCTATGCTGGTTTCTTCCCCTTTCAATAGAATTGGATATTGA

Peptide Sequence

PEP ID

XP_016511379.1
PEP Infomation

PREDICTED: probable pectinesterase 29 [Nicotiana tabacum]
Sequence

MASFFCKTLVFFFMGFVELGNARYISDFQWKQQKMKYTTVYVDPSGHGQFKTIQSAIDSV
PQNNQNWICINIKAGQYREQVKIPREKPYIYLKGGDQGKTSVTWDAHDSIATDATFTSEA
DNTIVESITFINSYNYPPKSNNNPRVVAVAAMISGDKSVFYRCEFLGLQDTLWDVQGRHY
FKLCTIEGAVDFIFGNGQSLYESCTISVNARALEGLTGFITAQGRSNPKDESGFIFKNCN
VIGSGQTFLGRPWRDYARVIFYGCNMSNVITPEGWTAGVYVGKEKQLTFAEESCKGMGSS
TSKRVQWEAKLSQQELQQLTSLSFIDNEGWITKQPLKMDILNQNDPTDVNTHASAVAAAG
GVANTSVDINNPLCLHPSDNPGAMLVSSPFNRIGY

Transcript Sequence

Gene sequence data has not been registered.